Blast servers available for the following virus:

• HIV (Human Immunodeficiency Virus) Blast Search Server

• HCV (Hepatitis C Virus) Blast Search Server

• HBV (Hepatitis B Virus) Blast Search Server

Blast your own database

• BlastServer A program that allows the user to upload a custom library in FASTA format, and then search it using blast

Alignment tools using Blast:

• BlastAlign Web Interface A program that uses blast to align nucleotide sequences that have large indels (INsertions/DELetions) or are otherwise difficult to align

Others BLAST severs online:

• RNA Virus Database
• BLAST at NCBI
• ViroBlast at Dr. Mullins Lab at University of Washington
• HIV Subtyping tool at the Retroviruses Resources at NCBI
• HIV BLAST at Los Alamos HIV Sequence Database
• SIV/HIV locator tool at Los Alamos HIV Sequence Database